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Lydia Allegranza France

Lydia Allegranza France

AI Research Fellow & Scientific Software Engineer

Oxford, Oxfordshire, GB

Background


About

About

Interdisciplinary researcher in AI and biology. Working at the intersection of natural motion, dynamical systems, explainable machine learning, and animal biomechanics, with a focus on reproducibility and open scientific software.

Work Experience

Work Experience

  • Schmidt AI in Science Fellow, University of Oxford

    Jun, 2024 - Present

    Developing data-driven and explainable AI methods to model bird flight as a dynamic morphing system. Focused on shape analysis, rough path signatures, and interpretable decompositions of motion.

    • Applying decomposition methods to bird wing motion

    • Collaborating across mathematics, zoology, and computer science

    • Developing open-source analysis tools for natural motion

  • Research Data Scientist, The Alan Turing Institute

    Jul, 2021 - Present

    Collaborative scientific software engineering and AI research across academic and public sector projects. Worked in domains from digital humanities, trusted digital signatures, and urban analytics. Most recently, research with GNNs for AI weather forecasting in partnership with the UK Met Office.

    • Developing GNN-based models for spatiotemporal forecasting

    • Scalable workflows using HPC and Azure

    • Co-led training and reproducibility initiatives for research software

  • Biological Sciences Lecturer, University of Oxford - Magdalen College

    Oct, 2020 - Present

    Tutorial and course-based teaching across zoology, behaviour, statistics, and programming for undergraduates. Ongoing contributor to interdisciplinary methods teaching across DTC programmes.

    • Course creation in Python, R, MATLAB, version control, and data science

    • Student support and supervision in quantitative biosciences

  • Postdoctoral Research Assistant, University of Oxford - Department of Zoology

    Aug, 2019 - Jul, 20211 year 11 months

    Studied flight control, obstacle avoidance, and vision-guided behaviour in birds. Recorded over 4 million data points using a custom motion capture system.

    • ERC-funded research into visually guided flight

    • Fieldwork and experimental design with Harris hawks and zebra finches

Projects Experience

Projects Experience

  • Morphing Shape Space of Hawk Flight

    Feb, 2021 - Present

    Principal component analysis of 3D wing and tail kinematics in Harris' hawk, enabling generalisable shape modes across morphologies.

  • Comparative Study of Morphing Flight

    Apr, 2025 - Present

    Cross-species comparison of morphing strategies in birds using projected shape modes, with data from kestrels, pigeons, and hawks.

  • Morphing Flight in Gust Manoeuvres

    Jun, 2025 - Present

    Analysis of pigeon and kestrel responses to wind gusts using shape-based methods to quantify adaptive morphing during unsteady flight.

  • Dynamic Decomposition of Wings During Flapping

    May, 2024 - Present

    Application of Dynamic Mode Decomposition (DMD) to isolate temporal patterns in wing and tail movement during flight.

  • Shape Analysis of Flight Trajectories

    Feb, 2022 - Present

    Elastic shape analysis of 3D flight paths grouped by individual and context (e.g., perch distance) using SRVF and Karcher means.

  • Data Signatures in Animal Motion

    Jul, 2025 - Present

    Exploring the use of rough paths and time-series signatures to characterise differences in flapping and locomotion control.

  • High-Dimensional Spider Biomechanics Decomposition

    Jul, 2024 - Present

    Morphing and dynamics analyses of leg and body markers in spiders during walking.

  • Geometric Machine Learning of Wing Shapes in Flight

    Jul, 2025 - Present

    Developing ML techniques for representing and comparing wing shapes from motion capture data.

  • FastNet: AI for Weather Forecasting

    Feb, 2024 - Present

    GNN-based predictive models using HPC and cloud infrastructure, in collaboration with the Met Office.

  • Open Research Software Teaching

    Oct, 2020 - Present

    Course design and delivery across institutions on reproducible programming, research data science, and scientific computing.

Skills

Skills

  • Programming

    Python

    Rust

    MATLAB

    R

    Jupyter

    PyTorch

    TensorFlow

    Git

    Docker

    DVC

    Azure

  • Scientific Methods

    Motion Capture

    Photogrammetry

    PCA

    Dynamic Mode Decomposition

    Shape Analysis

    Rough Path Signatures

    Unsupervised ML

    Trajectory Analysis

    Dynamical Systems

    Reproducible Research

    Scientific Software

  • Teaching

    Sensory Biology

    Animal Behaviour

    Statistics

    Scientific Python/R

    Research Software Engineering

    Version Control

    Data Visualisation

    Data Science

Education

Education

  • Interdisciplinary Bioscience, DPhil, University of Oxford

    Sep, 2014 - Jun, 2019

  • Sensory Biophysics, MSc by Research, University of Bristol

    Sep, 2013 - Jun, 2014

  • Zoology, BSc (Hons), University of Bristol

    Sep, 2010 - Jun, 2013

Publications

Publications

Interests

Interests

  • Improv Comedy

    Oxford ImpsEdinburgh Fringe
  • Science Communication

    PodcastsLive showsYouTube